|
| | | | |
| | | |
| Stat |
Members: 3645
Articles: 2'500'096
Articles rated: 2609
19 April 2024 |
|
| | | | |
|
Article overview
| |
|
|
The genome of black cottonwood, Populus trichocarpa (Torr. & Gray) | | G A Tuskan
; S Difazio
; S Jansson
; J Bohlmann
; I Grigoriev
; U Hellsten
; N Putnam
; S Ralph
; S Rombauts
; A Salamov
; J Schein
; L Sterck
; A Aerts
; R R Bhalerao
; R P Bhalerao
; D Blaudez
; W Boerjan
; A Brun
; A Brunner
; V Busov
; M Campbell
; J Carlson
; M Chalot
; J Chapman
; G-L Chen
; D Cooper
; P M Coutinho
; J Couturier
; S Covert
; Q Cronk
; R Cunningham
; J Davis
; S Degroeve
; A Déjardin
; C Depamphilis
; J Detter
; B Dirks
; I Dubchak
; S Duplessis
; J Ehlting
; B Ellis
; K Gendler
; D Goodstein
; M Gribskov
; J Grimwood
; A Groover
; L Gunter
; B Hamberger
; B Heinze
; Y Helariutta
; B Henrissat
; D Holligan
; R Holt
; W Huang
; N Islam-Faridi
; S Jones
; M Jones-Rhoades
; R Jorgensen
; C Joshi
; J Kangasjärvi
; J Karlsson
; C Kelleher
; R Kirkpatrick
; M Kirst
; A Kohler
; U Kalluri
; F Larimer
; J Leebens-Mack
; J-C Leplé
; P Locascio
; Y Lou
; S Lucas
; F Martin
; B Montanini
; C Napoli
; D R Nelson
; C Nelson
; K Nieminen
; O Nilsson
; V Pereda
; G Peter
; R Philippe
; G Pilate
; A Poliakov
; J Razumovskaya
; P Richardson
; C Rinaldi
; K Ritl
; P Rouzé
; D Ryaboy
; J Schmutz
; J Schrader
; B Segerman
; H Shin
; A Siddiqui
; F Sterky
; A Terry
; C-J Tsai
; E Uberbacher
; P Unneberg
; J Vahala
; K Wall
; S Wessler
; G Yang
; T Yin
; C Douglas
; M Marra
; G Sandberg
; Y Van de Peer
; D Rokhsar
; | | Date: |
15 Sep 2006 | | Journal: | Science, 313 (5793), 1596-604 | | Abstract: | We report the draft genome of the black cottonwood tree, Populus trichocarpa. Integration of shotgun sequence assembly with genetic mapping enabled chromosome-scale reconstruction of the genome. More than 45,000 putative protein-coding genes were identified. Analysis of the assembled genome revealed a whole-genome duplication event; about 8000 pairs of duplicated genes from that event survived in the Populus genome. A second, older duplication event is indistinguishably coincident with the divergence of the Populus and Arabidopsis lineages. Nucleotide substitution, tandem gene duplication, and gross chromosomal rearrangement appear to proceed substantially more slowly in Populus than in Arabidopsis. Populus has more protein-coding genes than Arabidopsis, ranging on average from 1.4 to 1.6 putative Populus homologs for each Arabidopsis gene. However, the relative frequency of protein domains in the two genomes is similar. Overrepresented exceptions in Populus include genes associated with lignocellulosic wall biosynthesis, meristem development, disease resistance, and metabolite transport. | | Source: | PubMed, pmid16973872 doi: 10.1126/science.1128691 | | Services: | Forum | Review | Favorites | |
|
|
No review found.
Did you like this article?
Note: answers to reviews or questions about the article must be posted in the forum section.
Authors are not allowed to review their own article. They can use the forum section.
browser Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
|
| |
|
|
|
|
News, job offers and information for researchers and scientists:
| |
REGISTER