|
| | | | |
| | | |
| Stat |
Members: 3645
Articles: 2'501'711
Articles rated: 2609
20 April 2024 |
|
| | | | |
|
Article overview
| |
|
|
Universality classes in folding times of proteins | | Marek Cieplak
; Trinh Xuan Hoang
; | | Date: |
22 Jul 2002 | | Journal: | Biophys. J. 84, 475-488 (2003) | | Subject: | Statistical Mechanics; Soft Condensed Matter; Biomolecules | cond-mat.stat-mech cond-mat.soft q-bio.BM | | Abstract: | Molecular dynamics simulations in simplified models allow one to study the scaling properties of folding times for many proteins together under a controlled setting. We consider three variants of the Go models with different contact potentials and demonstrate scaling described by power laws and no correlation with the relative contact order parameter. We demonstrate existence of at least three kinetic universality classes which are correlated with the types of structure: the alpha-, alpha--beta-, and beta- proteins have the scaling exponents of about 1.7, 2.5, and 3.2 respectively. The three classes merge into one when the contact range is truncated at a ’reasonable’ value. We elucidate the role of the potential associated with the chirality of a protein. | | Source: | arXiv, cond-mat/0207510 | | Services: | Forum | Review | PDF | Favorites | |
|
|
No review found.
Did you like this article?
Note: answers to reviews or questions about the article must be posted in the forum section.
Authors are not allowed to review their own article. They can use the forum section.
browser Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)
|
| |
|
|
|
|
News, job offers and information for researchers and scientists:
| |
REGISTER