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A draft sequence of the rice genome (Oryza sativa L. ssp. indica) | | Jun Yu
; Songnian Hu
; Jun Wang
; Gane Ka-Shu Wong
; Songgang Li
; Bin Liu
; Yajun Deng
; Li Dai
; Yan Zhou
; Xiuqing Zhang
; Mengliang Cao
; Jing Liu
; Jiandong Sun
; Jiabin Tang
; Yanjiong Chen
; Xiaobing Huang
; Wei Lin
; Chen Ye
; Wei Tong
; Lijuan Cong
; Jianing Geng
; Yujun Han
; Lin Li
; Wei Li
; Guangqiang Hu
; Xiangang Huang
; Wenjie Li
; Jian Li
; Zhanwei Liu
; Long Li
; Jianping Liu
; Qiuhui Qi
; Jinsong Liu
; Li Li
; Tao Li
; Xuegang Wang
; Hong Lu
; Tingting Wu
; Miao Zhu
; Peixiang Ni
; Hua Han
; Wei Dong
; Xiaoyu Ren
; Xiaoli Feng
; Peng Cui
; Xianran Li
; Hao Wang
; Xin Xu
; Wenxue Zhai
; Zhao Xu
; Jinsong Zhang
; Sijie He
; Jianguo Zhang
; Jichen Xu
; Kunlin Zhang
; Xianwu Zheng
; Jianhai Dong
; Wanyong Zeng
; Lin Tao
; Jia Ye
; Jun Tan
; Xide Ren
; Xuewei Chen
; Jun He
; Daofeng Liu
; Wei Tian
; Chaoguang Tian
; Hongai Xia
; Qiyu Bao
; Gang Li
; Hui Gao
; Ting Cao
; Juan Wang
; Wenming Zhao
; Ping Li
; Wei Chen
; Xudong Wang
; Yong Zhang
; Jianfei Hu
; Jing Wang
; Song Liu
; Jian Yang
; Guangyu Zhang
; Yuqing Xiong
; Zhijie Li
; Long Mao
; Chengshu Zhou
; Zhen Zhu
; Runsheng Chen
; Bailin Hao
; Weimou Zheng
; Shouyi Chen
; Wei Guo
; Guojie Li
; Siqi Liu
; Ming Tao
; Jian Wang
; Lihuang Zhu
; Longping Yuan
; Huanming Yang
; | | Date: |
5 Apr 2002 | | Journal: | Science, 296 (5565), 79-92 | | Abstract: | We have produced a draft sequence of the rice genome for the most widely cultivated subspecies in China, Oryza sativa L. ssp. indica, by whole-genome shotgun sequencing. The genome was 466 megabases in size, with an estimated 46,022 to 55,615 genes. Functional coverage in the assembled sequences was 92.0%. About 42.2% of the genome was in exact 20-nucleotide oligomer repeats, and most of the transposons were in the intergenic regions between genes. Although 80.6% of predicted Arabidopsis thaliana genes had a homolog in rice, only 49.4% of predicted rice genes had a homolog in A. thaliana. The large proportion of rice genes with no recognizable homologs is due to a gradient in the GC content of rice coding sequences. | | Source: | PubMed, pmid11935017 doi: 10.1126/science.1068037 | | Services: | Forum | Review | Favorites | |
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