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Global optimization of proteins using a dynamical lattice model | | F. Dressel
; S. Kobe
; | | Date: |
16 Dec 2004 | | Subject: | Biomolecules | q-bio.BM | | Abstract: | The problem to predict protein structure from the sequence of amino acids only is approached by the introduction of a dynamical lattice model, which is constructed on the basis of the atomic distances and bonding angles in molecules. Using pairwise interactions between amino acids, the exact ground states of model proteins are calculated using a method of global optimization with respect to the total energy. The obtained secondary structures are in good agreement with the corresponding experimentally found structures. | | Source: | arXiv, q-bio.BM/0412031 | | Services: | Forum | Review | PDF | Favorites | |
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